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LOC100366231 X-linked lymphocyte-regulated 5C-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 100366231, discontinued on 18-May-2021

Summary

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Symbol
LOC100366231provided by RGD
Full Name
X-linked lymphocyte-regulated 5C-likeprovided by RGD
Primary source
RGD:2324027
Gene type
protein coding
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Restricted expression toward (RPKM 73.0) See more
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Genomic context

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See LOC100366231 in Genome Data Viewer
Location:
chromosome: X
Exon count:
15
Annotation release Status Assembly Chr Location
106 latest, but not current Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (147060791..147076946, complement)
106 latest, but not current Rn_Celera (GCF_000002265.2) Unplaced Scaffold NW_001091358.1 (856..4435)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

General protein information

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Names
X-linked lymphocyte-regulated 5C-like
X-linked lymphocyte-regulated protein 3A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005100.4 Reference Rnor_6.0 Primary Assembly

    Range
    147060791..147076946 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008759625.2 → XP_008757847.1  

  2. XM_017590174.1 → XP_017445663.1  

  3. XM_008759626.2 → XP_008757848.1  

  4. XM_008759628.2 → XP_008757850.1  

  5. XM_008759623.1 → XP_008757845.1  

  6. XM_008759629.1 → XP_008757851.1  

  7. XM_006229632.2 → XP_006229694.1  

  8. XM_008759627.2 → XP_008757849.1  

  9. XM_003748905.4 → XP_003748953.1  

  10. XM_008759624.2 → XP_008757846.1  

Alternate Rn_Celera

Genomic

  1. NW_001091358.1 Alternate Rn_Celera

    Range
    856..4435
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017588614.1 → XP_017444103.1  

  2. XM_017588615.1 → XP_017444104.1  

Gene LinkOut

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