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SNX18P18 sorting nexin 18 pseudogene 18 [ Homo sapiens (human) ]

Gene ID: 100419021, updated on 28-Oct-2024

Summary

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Official Symbol
SNX18P18provided by HGNC
Official Full Name
sorting nexin 18 pseudogene 18provided by HGNC
Primary source
HGNC:HGNC:39626
See related
AllianceGenome:HGNC:39626
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See SNX18P18 in Genome Data Viewer
Location:
1q21.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 Unlocalized Scaffold NT_187361.1 (38694..39447, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (127893586..127894339)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (143156455..143157208, complement)

NT_187361.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105379854 Neighboring gene uncharacterized LOC101060632 Neighboring gene sorting nexin 18 pseudogene 19 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:143201417-143201917 Neighboring gene uncharacterized LOC124905319

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_026983.1 

    Range
    101..854
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NT_187361.1 Reference GRCh38.p14 Primary Assembly

    Range
    38694..39447 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    127893586..127894339
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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