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LOC100419861 metallophosphoesterase 1 pseudogene [ Homo sapiens (human) ]

Gene ID: 100419861, updated on 17-Sep-2024

Summary

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Gene symbol
LOC100419861
Gene description
metallophosphoesterase 1 pseudogene
See related
Ensembl:ENSG00000251286
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC100419861 in Genome Data Viewer
Location:
4q12
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (52440509..52441535, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (55927363..55928389, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (53306675..53307701, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancers GRCh37_chr4:52917119-52917620 and GRCh37_chr4:52917621-52918120 Neighboring gene spermatogenesis associated 18 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:53068243-53068918 Neighboring gene NANOG hESC enhancer GRCh37_chr4:53135291-53135887 Neighboring gene uncharacterized LOC107986279 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:53243316-53243864 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:53243865-53244412 Neighboring gene small nucleolar RNA U13 Neighboring gene RNA, U6 small nuclear 1252, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_025103.1 

    Range
    101..1127
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    52440509..52441535 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    55927363..55928389 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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