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HMGB3P3 high mobility group box 3 pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 100419949, updated on 17-Sep-2024

Summary

Official Symbol
HMGB3P3provided by HGNC
Official Full Name
high mobility group box 3 pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:39102
See related
Ensembl:ENSG00000250730 AllianceGenome:HGNC:39102
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See HMGB3P3 in Genome Data Viewer
Location:
5p15.32
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (6289807..6290613)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (6218485..6219291)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (6289920..6290726)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374634 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22326 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22327 Neighboring gene uncharacterized LOC105374636 Neighboring gene Sharpr-MPRA regulatory region 9370 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15895 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr5:5943193-5944392 Neighboring gene NANOG hESC enhancer GRCh37_chr5:6038201-6038702 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr5:6158863-6160062 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22328 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:6315844-6316069 Neighboring gene long intergenic non-protein coding RNA 2145 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:6343159-6343659 Neighboring gene Sharpr-MPRA regulatory region 13881 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:6367530-6367697 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22329 Neighboring gene mediator complex subunit 10

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_024651.1 

    Range
    101..907
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    6289807..6290613
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    6218485..6219291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)