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ITM2BP1 integral membrane protein 2B pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100420308, updated on 17-Sep-2024

Summary

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Official Symbol
ITM2BP1provided by HGNC
Official Full Name
integral membrane protein 2B pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:20919
See related
Ensembl:ENSG00000266853 AllianceGenome:HGNC:20919
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ITM2BP; HsT33912
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Genomic context

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See ITM2BP1 in Genome Data Viewer
Location:
17q11.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (27612573..27613251, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (28554047..28554725, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (25939599..25940277, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene kinase suppressor of ras 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:25859917-25860102 Neighboring gene MSANTD3 pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:25865210-25866051 Neighboring gene uncharacterized LOC124903960 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:25867223-25868022 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:25869832-25870332 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:25870333-25870833 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8329 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:25894115-25895067 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:25896821-25897581 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11908 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:25917327-25917828 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:25917829-25918328 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:25957839-25958656 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:25964969-25965523 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:25970104-25970797 Neighboring gene galectin 9 Neighboring gene nitric oxide synthase 2 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_026163.1 

    Range
    101..779
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    27612573..27613251 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    28554047..28554725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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