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LOC100421527 DnaJ heat shock protein family (Hsp40) member C8 pseudogene [ Homo sapiens (human) ]

Gene ID: 100421527, updated on 17-Sep-2024

Summary

Gene symbol
LOC100421527
Gene description
DnaJ heat shock protein family (Hsp40) member C8 pseudogene
See related
Ensembl:ENSG00000271702
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See LOC100421527 in Genome Data Viewer
Location:
18q23
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (77632887..77633426, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (77865808..77866347, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (75344843..75345382, complement)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 926 Neighboring gene B double prime 1 pseudogene Neighboring gene uncharacterized LOC107985172 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:75238409-75239170 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:75242411-75242935 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:75242936-75243459 Neighboring gene ReSE screen-validated silencer GRCh37_chr18:75256898-75257093 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:75300889-75301390 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13535 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9565 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9566 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:75370231-75371192 Neighboring gene uncharacterized LOC107985129 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:75465232-75465784 Neighboring gene NANOG hESC enhancer GRCh37_chr18:75474392-75475106 Neighboring gene MPRA-validated peak3188 silencer Neighboring gene VISTA enhancer hs1020 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr18:75535169-75536368 Neighboring gene VISTA enhancer hs1186 Neighboring gene RNA, 5S ribosomal pseudogene 461

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association study of chemotherapeutic agent-induced severe neutropenia/leucopenia for patients in Biobank Japan.
EBI GWAS Catalog

General gene information

Other Names

  • DnaJ (Hsp40) homolog, subfamily C, member 8 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_026304.1 

    Range
    101..640
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    77632887..77633426 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    77865808..77866347 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)