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LOC100422537 signal sequence receptor subunit 3 pseudogene [ Homo sapiens (human) ]

Gene ID: 100422537, updated on 17-Sep-2024

Summary

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Gene symbol
LOC100422537
Gene description
signal sequence receptor subunit 3 pseudogene
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC100422537 in Genome Data Viewer
Location:
1p31.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (78091406..78092195)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (77930190..77930979)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (78557090..78557879)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene nitrilase family member 2 pseudogene Neighboring gene GIPC PDZ domain containing family member 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1229 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1230 Neighboring gene RNA, U6 small nuclear 1102, pseudogene Neighboring gene RNA, 5S ribosomal pseudogene 22 Neighboring gene uncharacterized LOC107984997 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1231 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1232 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1233

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • signal sequence receptor, gamma (translocon-associated protein gamma) pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_027106.2 

    Range
    101..890
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    78091406..78092195
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    77930190..77930979
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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