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MIR548V microRNA 548v [ Homo sapiens (human) ]

Gene ID: 100422850, updated on 17-Sep-2024

Summary

Official Symbol
MIR548Vprovided by HGNC
Official Full Name
microRNA 548vprovided by HGNC
Primary source
HGNC:HGNC:38302
See related
Ensembl:ENSG00000265520 miRBase:MI0014174; AllianceGenome:HGNC:38302
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See MIR548V in Genome Data Viewer
Location:
8p22
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (17681578..17681657, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (17948722..17948801, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (17539087..17539166, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene platelet derived growth factor receptor like Neighboring gene uncharacterized LOC107986919 Neighboring gene uncharacterized LOC124901891 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:17516891-17517391 Neighboring gene Sharpr-MPRA regulatory region 10631 Neighboring gene microtubule associated scaffold protein 1 Neighboring gene Sharpr-MPRA regulatory region 14364 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27047 Neighboring gene RNA, 5S ribosomal pseudogene 256 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:17622301-17622802 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:17622803-17623302 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18963 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18964 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18965 Neighboring gene MTUS1 divergent transcript

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_036103.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC124069
    Related
    ENST00000584165.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    17681578..17681657 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    17948722..17948801 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)