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MIR4296 microRNA 4296 [ Homo sapiens (human) ]

Gene ID: 100423041, updated on 10-Oct-2023

Summary

Official Symbol
MIR4296provided by HGNC
Official Full Name
microRNA 4296provided by HGNC
Primary source
HGNC:HGNC:38178
See related
Ensembl:ENSG00000264572 miRBase:MI0015823; AllianceGenome:HGNC:38178
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See MIR4296 in Genome Data Viewer
Location:
10q26.13
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (125032783..125032870, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (125913792..125913879, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (126721352..126721439, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2921 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2922 Neighboring gene zinc finger RANBP2-type containing 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4189 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4188 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_10909 Neighboring gene uncharacterized LOC124902520 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:126688910-126689410 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:126691205-126691746 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:126691747-126692287 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:126696421-126696926 Neighboring gene C-terminal binding protein 2 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:126715397-126715939 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:126729801-126730300 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:126736559-126737142 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:126740341-126741097 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:126746343-126747091 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:126747092-126747839 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:126750177-126750378 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4191 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:126751552-126752149 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:126767335-126767836 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:126770120-126770948 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:126770949-126771776 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:126773433-126774260 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:126775917-126776743 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:126791223-126792047 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:126795355-126795874 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:126801041-126801540 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:126805494-126806319 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:126824413-126825010 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:126826210-126826808 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:126826809-126827407 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2923 Neighboring gene Sharpr-MPRA regulatory region 360 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:126840048-126841009 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:126849903-126850512 Neighboring gene mitochondrial ribosomal protein S21 pseudogene 6 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:126881561-126882062 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4192 Neighboring gene VISTA enhancer hs330 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr10:126915977-126917176 Neighboring gene uncharacterized LOC105378541 Neighboring gene NANOG hESC enhancer GRCh37_chr10:126918015-126918529 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr10:126919634-126920833

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_036178.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL731571
    Related
    ENST00000581038.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    125032783..125032870 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    125913792..125913879 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)