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MTRNR2L9 MT-RNR2 like 9 (pseudogene) [ Homo sapiens (human) ]

Gene ID: 100463487, updated on 17-Sep-2024

Summary

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Official Symbol
MTRNR2L9provided by HGNC
Official Full Name
MT-RNR2 like 9 (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:37166
See related
AllianceGenome:HGNC:37166
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HN9
Summary
Predicted to enable receptor antagonist activity. Predicted to be involved in negative regulation of execution phase of apoptosis. Predicted to be located in cytoplasm and extracellular region. [provided by Alliance of Genome Resources, Apr 2022]
Annotation information
Note: It is unclear if this is a transcribed protein-coding gene, or if it is a nuclear pseudogene of the mitochondrial MT-RNR2 gene. [16 Mar 2015]
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Genomic context

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See MTRNR2L9 in Genome Data Viewer
Location:
6q11.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (61574103..61574550)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (62718927..62719373)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (62284008..62284455)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:57811262-57811857 Neighboring gene glyceraldehyde 3 phosphate dehydrogenase pseudogene 41 Neighboring gene NANOG hESC enhancer GRCh37_chr6:57850183-57850684 Neighboring gene RBBP4 pseudogene 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:62043813-62044313 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:62043312-62043812 Neighboring gene OCT4 hESC enhancer GRCh37_chr6:61904506-61905007 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:62315562-62316235 Neighboring gene Sharpr-MPRA regulatory region 774 Neighboring gene KH RNA binding domain containing, signal transduction associated 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:62650913-62651412 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17306 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:63202223-63202723 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:63295707-63296254 Neighboring gene dihydrofolate reductase pseudogene 5 Neighboring gene NANOG hESC enhancer GRCh37_chr6:63614387-63614952 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:63708848-63710047 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:63762677-63763208 Neighboring gene NANOG hESC enhancer GRCh37_chr6:63790275-63790776 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:63796218-63796424 Neighboring gene keratin, type II pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Homology

Other Names

  • MT-RNR2 pseudogene 9
  • MTRNR2-like 9
  • humanin-like 9

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables receptor antagonist activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in negative regulation of execution phase of apoptosis IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_029631.2 

    Range
    101..548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    61574103..61574550
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    62718927..62719373
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001190706.2: Suppressed sequence

    Description
    NM_001190706.2: This RefSeq was removed because it is now thought that this gene does not encode a protein.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0CJ76.1 GenPept UniProtKB/Swiss-Prot:P0CJ76

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Research Materials