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Lao1 L-amino acid oxidase 1 [ Mus musculus (house mouse) ]

Gene ID: 100470, updated on 2-Nov-2024

Summary

Official Symbol
Lao1provided by MGI
Official Full Name
L-amino acid oxidase 1provided by MGI
Primary source
MGI:MGI:2140628
See related
Ensembl:ENSMUSG00000024903 AllianceGenome:MGI:2140628
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Enables L-amino-acid oxidase activity. Acts upstream of or within amino acid catabolic process. Located in extracellular region. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Low expression observed in reference dataset See more
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Genomic context

See Lao1 in Genome Data Viewer
Location:
4 D2.1; 4 55.24 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (118819164..118826107)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (118961967..118968910)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene 12865 Neighboring gene predicted gene 12856 Neighboring gene predicted gene 12863 Neighboring gene predicted gene, 24352 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Targeted (1)  1 citation

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables L-amino-acid oxidase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables L-amino-acid oxidase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables polyamine oxidase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in amino acid catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within amino acid catabolic process IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular region IDA
Inferred from Direct Assay
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_133892.4NP_598653.3  L-amino acid oxidase 1 precursor

    See identical proteins and their annotated locations for NP_598653.3

    Status: VALIDATED

    Source sequence(s)
    AK052781, AL606922
    Consensus CDS
    CCDS18568.1
    UniProtKB/TrEMBL
    B1ARV3, Q8VEN4
    Related
    ENSMUSP00000062834.5, ENSMUST00000058651.5
    Conserved Domains (2) summary
    pfam01593
    Location:67508
    Amino_oxidase; Flavin containing amine oxidoreductase
    pfam13450
    Location:62129
    NAD_binding_8; NAD(P)-binding Rossmann-like domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    118819164..118826107
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)