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Gm17619 predicted gene, 17619 [ Mus musculus (house mouse) ]

Gene ID: 100502923, updated on 22-Oct-2024

Summary

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Official Symbol
Gm17619provided by MGI
Official Full Name
predicted gene, 17619provided by MGI
Primary source
MGI:MGI:4937253
See related
Ensembl:ENSMUSG00000120007 AllianceGenome:MGI:4937253
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm17619 in Genome Data Viewer
Location:
2 H3; 2 90.42 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (170034368..170035973, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (170192448..170194053, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene zinc finger protein 217 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:169978978-169979087 Neighboring gene STARR-positive B cell enhancer ABC_E9210 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:169980510-169980753 Neighboring gene STARR-positive B cell enhancer ABC_E10165 Neighboring gene STARR-positive B cell enhancer ABC_E2658 Neighboring gene predicted gene, 34403 Neighboring gene STARR-seq mESC enhancer starr_06515 Neighboring gene STARR-seq mESC enhancer starr_06518 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:170044751-170044934 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:170046692-170046879 Neighboring gene STARR-positive B cell enhancer ABC_E8798 Neighboring gene STARR-seq mESC enhancer starr_06522 Neighboring gene STARR-positive B cell enhancer ABC_E7890 Neighboring gene STARR-positive B cell enhancer ABC_E821 Neighboring gene STARR-positive B cell enhancer ABC_E3423 Neighboring gene STARR-seq mESC enhancer starr_06524 Neighboring gene silica-induced gene 111 Neighboring gene STARR-positive B cell enhancer ABC_E10166 Neighboring gene STARR-positive B cell enhancer ABC_E1017 Neighboring gene predicted gene, 34542

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Mutagenesis of diploid mammalian genes by gene entrapment. Lin Q, et al. Nucleic Acids Res, 2006. PMID 17062627, Free PMC Article
  2. Global discovery of erythroid long noncoding RNAs reveals novel regulators of red cell maturation. Alvarez-Dominguez JR, et al. Blood, 2014 Jan 23. PMID 24200680, Free PMC Article
  3. Widespread and dynamic translational control of red blood cell development. Alvarez-Dominguez JR, et al. Blood, 2017 Feb 2. PMID 27899360, Free PMC Article
  4. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  5. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_157067.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL844576, BX513093
    Related
    ENSMUST00000320092.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    170034368..170035973 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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