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Gdap10 ganglioside-induced differentiation-associated-protein 10 [ Mus musculus (house mouse) ]

Gene ID: 100504486, updated on 2-Nov-2024

Summary

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Official Symbol
Gdap10provided by MGI
Official Full Name
ganglioside-induced differentiation-associated-protein 10provided by MGI
Primary source
MGI:MGI:1338008
See related
AllianceGenome:MGI:1338008
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gdap-ps
Summary
Acts upstream of or within response to bacterium. Is expressed in brain and embryo. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Gdap10 in Genome Data Viewer
Location:
12 A3; 12 13.75 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (32874115..32876918)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (32824116..32826919)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH type containing 14 pseudogene Neighboring gene predicted gene, 40376 Neighboring gene STARR-positive B cell enhancer ABC_E8480 Neighboring gene STARR-seq mESC enhancer starr_31880 Neighboring gene nicotinamide phosphoribosyltransferase Neighboring gene predicted gene, 33484 Neighboring gene STARR-positive B cell enhancer ABC_E10742 Neighboring gene STARR-positive B cell enhancer ABC_E5326 Neighboring gene RIKEN cDNA 4933406C10 gene Neighboring gene meteorin, glial cell differentiation regulator-like pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic dissection of the fatty liver QTL Fl1sa by using congenic mice and identification of candidate genes in the liver and epididymal fat. Suzuki M, et al. BMC Genet, 2016 Nov 17. PMID 27855657, Free PMC Article
  2. Isolation of 10 differentially expressed cDNAs in differentiated Neuro2a cells induced through controlled expression of the GD3 synthase gene. Liu H, et al. J Neurochem, 1999 May. PMID 10217254
  3. Impact of lactobacilli on orally acquired listeriosis. Archambaud C, et al. Proc Natl Acad Sci U S A, 2012 Oct 9. PMID 23012479, Free PMC Article
  4. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • ganglioside-induced differentiation-associated-protein, pseudogene

Clone Names

  • MGC60602

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within response to bacterium IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045032.2 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    CT572998

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    32874115..32876918
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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