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LINC00708 long intergenic non-protein coding RNA 708 [ Homo sapiens (human) ]

Gene ID: 100507143, updated on 10-Oct-2023

Summary

Official Symbol
LINC00708provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 708provided by HGNC
Primary source
HGNC:HGNC:44694
See related
Ensembl:ENSG00000232170 AllianceGenome:HGNC:44694
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GS1-756B1.2
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC00708 in Genome Data Viewer
Location:
10p14
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (8259331..8268305, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (8260317..8269298, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (8301294..8310268, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984206 Neighboring gene PRP38 domain containing A pseudogene 1 Neighboring gene uncharacterized LOC107984205 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:8233580-8234508 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:8234509-8235437 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2119 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2988 Neighboring gene uncharacterized LOC105376396 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:8441548-8442048 Neighboring gene uncharacterized LOC105376397

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_108058.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC031880
    Related
    ENST00000428165.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    8259331..8268305 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    8260317..8269298 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)