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Ubb ubiquitin B [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100689268, updated on 8-Mar-2024

Summary

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Gene symbol
Ubb
Gene description
ubiquitin B
Locus tag
I79_001749
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Chub1; Ubiquitin
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613619.1 (2179608..2180069)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (76582735..76583880)

NW_003613619.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol glycan anchor biosynthesis class L Neighboring gene centromere protein V Neighboring gene transient receptor potential cation channel subfamily V member 2 Neighboring gene small nucleolar RNA SNORD49 Neighboring gene leucine rich repeat containing 75A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Novel structure of a Chinese hamster polyubiquitin gene. Nenoi M, et al. Biochim Biophys Acta, 1994 Feb 16. PMID 8142469
  2. Evolutionarily conserved structure of the 3' non-translated region of a Chinese hamster polyubiquitin gene. Nenoi M, et al. Biochim Biophys Acta, 1992 Apr 6. PMID 1314094
  3. Ubiquitin mRNA is a major stress-induced transcript in mammalian cells. Fornace AJ Jr, et al. Nucleic Acids Res, 1989 Feb 11. PMID 2537950, Free PMC Article
  4. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tag activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modification-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyubiquitin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001244381.1 → NP_001231310.1  polyubiquitin

    See identical proteins and their annotated locations for NP_001231310.1

    Status: PROVISIONAL

    Source sequence(s)
    X60390
    UniProtKB/TrEMBL
    G3I129
    Conserved Domains (1) summary
    cd01803
    Location:77 → 152
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613619.1 Reference CriGri_1.0 Primary Assembly

    Range
    2179608..2180069
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    76582735..76583880
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P62976.2 GenPept UniProtKB/Swiss-Prot:P62976

Gene LinkOut

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