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Fbxl18 F-box and leucine rich repeat protein 18 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100767914, updated on 8-Mar-2024

Summary

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Gene symbol
Fbxl18
Gene description
F-box and leucine rich repeat protein 18
Locus tag
I79_001667
See related
Ensembl:ENSCGRG00015013836
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Fbxl18 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613618.1 (952729..977024)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (79435613..79459899, complement)

NW_003613618.1Genomic Context describing neighboring genes Neighboring gene fascin actin-bundling protein 1 Neighboring gene actin beta Neighboring gene trinucleotide repeat containing 18 Neighboring gene solute carrier family 29 member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box/LRR-repeat protein 18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613618.1 Reference CriGri_1.0 Primary Assembly

    Range
    952729..977024
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007648815.3 → XP_007647005.1  F-box/LRR-repeat protein 18

    See identical proteins and their annotated locations for XP_007647005.1

    UniProtKB/TrEMBL
    A0A9J7FVT0, G3GVD1
    Conserved Domains (2) summary
    sd00034
    Location:525 → 551
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:25 → 67
    F-box-like; F-box-like

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    79435613..79459899 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027413548.2 → XP_027269349.1  F-box/LRR-repeat protein 18

    UniProtKB/TrEMBL
    A0A9J7FVT0, G3GVD1
    Related
    ENSCGRP00015018036.2, ENSCGRT00015022155.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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