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Foxk1 forkhead box K1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100768479, updated on 19-Jun-2024

Summary

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Gene symbol
Foxk1
Gene description
forkhead box K1
See related
Ensembl:ENSCGRG00015013459
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Foxk1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613618.1 (1375434..1478370, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (78978597..79045891)

NW_003613618.1Genomic Context describing neighboring genes Neighboring gene Rap associating with DIL domain Neighboring gene poly(A) polymerase beta Neighboring gene adaptor related protein complex 5 subunit zeta 1 Neighboring gene sidekick cell adhesion molecule 1 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
forkhead box protein K1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613618.1 Reference CriGri_1.0 Primary Assembly

    Range
    1375434..1478370 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035459980.1 → XP_035315871.1  forkhead box protein K1 isoform X1

    Conserved Domains (2) summary
    PRK12323
    Location:305 → 587
    PRK12323; DNA polymerase III subunit gamma/tau
    cd20054
    Location:215 → 315
    FH_FOXK1; Forkhead (FH) domain found in Forkhead box protein K1 (FOXK1) and similar proteins

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    78978597..79045891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027413539.1 → XP_027269340.1  forkhead box protein K1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2QML7
    Related
    ENSCGRP00015017505.2, ENSCGRT00015021500.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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