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Card11 caspase recruitment domain family member 11 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100769055, updated on 8-Mar-2024

Summary

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Gene symbol
Card11
Gene description
caspase recruitment domain family member 11
Locus tag
I79_001680
See related
Ensembl:ENSCGRG00015013344
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Card11 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
23
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613618.1 (2891699..2932159)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (77485745..77526329, complement)

NW_003613618.1Genomic Context describing neighboring genes Neighboring gene sidekick cell adhesion molecule 1 Neighboring gene U6 spliceosomal RNA Neighboring gene G protein subunit alpha 12 Neighboring gene archaelysin family metallopeptidase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
caspase recruitment domain-containing protein 11
Names
Caspase recruitment domain-containing protein 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613618.1 Reference CriGri_1.0 Primary Assembly

    Range
    2891699..2932159
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035459989.1 → XP_035315880.1  caspase recruitment domain-containing protein 11

    UniProtKB/TrEMBL
    A0A8C2N791, A0A9J7H0P7
    Conserved Domains (5) summary
    COG1196
    Location:129 → 437
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00992
    Location:683 → 755
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd08808
    Location:24 → 109
    CARD_CARD11_CARMA1; Caspase activation and recruitment domain of CARD11-like proteins
    cl17036
    Location:780 → 842
    SH3; Src Homology 3 domain superfamily
    cl17190
    Location:1012 → 1146
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    77485745..77526329 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035444148.1 → XP_035300039.1  caspase recruitment domain-containing protein 11

    UniProtKB/TrEMBL
    A0A8C2N791, A0A9J7H0P7
    Related
    ENSCGRP00015017362.2, ENSCGRT00015021327.2
    Conserved Domains (5) summary
    COG1196
    Location:129 → 437
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00992
    Location:683 → 755
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd08808
    Location:24 → 109
    CARD_CARD11_CARMA1; Caspase activation and recruitment domain of CARD11-like proteins
    cl17036
    Location:780 → 842
    SH3; Src Homology 3 domain superfamily
    cl17190
    Location:1012 → 1146
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
Nucleotide Protein Strain
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