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Micall2 MICAL like 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100771058, updated on 19-Jun-2024

Summary

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Gene symbol
Micall2
Gene description
MICAL like 2
Locus tag
I79_001701
See related
Ensembl:ENSCGRG00015012449
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Micall2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
17
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613618.1 (4036419..4062945)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (76354273..76381229, complement)

NW_003613618.1Genomic Context describing neighboring genes Neighboring gene MAF bZIP transcription factor K Neighboring gene integrator complex subunit 1 Neighboring gene UNC homeobox

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MICAL-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613618.1 Reference CriGri_1.0 Primary Assembly

    Range
    4036419..4062945
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035460198.1 → XP_035316089.1  MICAL-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C2LJT7
    Conserved Domains (4) summary
    cd09444
    Location:188 → 241
    LIM_Mical_like_1; This domain belongs to the LIM domain family which are found on Mical (molecule interacting with CasL) like proteins
    pfam05109
    Location:345 → 751
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam12130
    Location:829 → 955
    DUF3585; Protein of unknown function (DUF3585)
    cd21253
    Location:2 → 107
    CH_MICALL2; calponin homology (CH) domain found in MICAL-like protein 2 and similar proteins

  2. XM_035460205.1 → XP_035316096.1  MICAL-like protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A8C2LJT7
    Conserved Domains (4) summary
    cd09444
    Location:188 → 241
    LIM_Mical_like_1; This domain belongs to the LIM domain family which are found on Mical (molecule interacting with CasL) like proteins
    pfam05109
    Location:345 → 751
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam12130
    Location:829 → 917
    DUF3585; Protein of unknown function (DUF3585)
    cd21253
    Location:2 → 107
    CH_MICALL2; calponin homology (CH) domain found in MICAL-like protein 2 and similar proteins

  3. XM_035460204.1 → XP_035316095.1  MICAL-like protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A8C2LJT7
    Conserved Domains (4) summary
    cd09444
    Location:188 → 241
    LIM_Mical_like_1; This domain belongs to the LIM domain family which are found on Mical (molecule interacting with CasL) like proteins
    pfam05109
    Location:345 → 751
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam12130
    Location:821 → 947
    DUF3585; Protein of unknown function (DUF3585)
    cd21253
    Location:2 → 107
    CH_MICALL2; calponin homology (CH) domain found in MICAL-like protein 2 and similar proteins

  4. XM_035460202.1 → XP_035316093.1  MICAL-like protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2LJT7
    Conserved Domains (4) summary
    cd09444
    Location:188 → 241
    LIM_Mical_like_1; This domain belongs to the LIM domain family which are found on Mical (molecule interacting with CasL) like proteins
    pfam05109
    Location:345 → 738
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam12130
    Location:828 → 954
    DUF3585; Protein of unknown function (DUF3585)
    cd21253
    Location:2 → 107
    CH_MICALL2; calponin homology (CH) domain found in MICAL-like protein 2 and similar proteins

  5. XM_035460211.1 → XP_035316102.1  MICAL-like protein 2 isoform X5

    Conserved Domains (3) summary
    cd09444
    Location:188 → 241
    LIM_Mical_like_1; This domain belongs to the LIM domain family which are found on Mical (molecule interacting with CasL) like proteins
    pfam05109
    Location:345 → 654
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cd21253
    Location:2 → 107
    CH_MICALL2; calponin homology (CH) domain found in MICAL-like protein 2 and similar proteins

RNA

  1. XR_004774770.1 RNA Sequence

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    76354273..76381229 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027413485.2 → XP_027269286.1  MICAL-like protein 2 isoform X8

    UniProtKB/TrEMBL
    A0A8C2LJT7, A0A9J7JLH1

  2. XM_035444786.1 → XP_035300677.1  MICAL-like protein 2 isoform X10

    UniProtKB/TrEMBL
    A0A8C2LJT7, A0A9J7H1E3
    Conserved Domains (4) summary
    cd09444
    Location:188 → 241
    LIM_Mical_like_1; This domain belongs to the LIM domain family which are found on Mical (molecule interacting with CasL) like proteins
    pfam05109
    Location:345 → 751
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam12130
    Location:829 → 917
    DUF3585; Protein of unknown function (DUF3585)
    cd21253
    Location:2 → 107
    CH_MICALL2; calponin homology (CH) domain found in MICAL-like protein 2 and similar proteins

  3. XM_027413483.2 → XP_027269284.1  MICAL-like protein 2 isoform X6

    UniProtKB/TrEMBL
    A0A8C2LJT7, A0A9J7G017
    Related
    ENSCGRP00015016178.1, ENSCGRT00015019861.2

  4. XM_027413484.2 → XP_027269285.1  MICAL-like protein 2 isoform X7

    UniProtKB/TrEMBL
    A0A8C2LJT7, A0A9J7FVK5
    Related
    ENSCGRP00015016211.2, ENSCGRT00015019895.2

  5. XM_027413490.2 → XP_027269291.1  MICAL-like protein 2 isoform X12

    UniProtKB/TrEMBL
    A0A8C2LJT7, A0A9J7FVB1

  6. XM_027413488.2 → XP_027269289.1  MICAL-like protein 2 isoform X11

    UniProtKB/TrEMBL
    A0A8C2LJT7, A0A9J7JPB0
    Conserved Domains (4) summary
    cd09444
    Location:105 → 158
    LIM_Mical_like_1; This domain belongs to the LIM domain family which are found on Mical (molecule interacting with CasL) like proteins
    PHA03247
    Location:148 → 685
    PHA03247; large tegument protein UL36; Provisional
    pfam12130
    Location:746 → 872
    DUF3585; Protein of unknown function (DUF3585)
    cl00030
    Location:1 → 24
    CH_SF; calponin homology (CH) domain superfamily

  7. XM_027413491.2 → XP_027269292.1  MICAL-like protein 2 isoform X13

    UniProtKB/TrEMBL
    A0A8C2LJT7, A0A9J7FWR2

  8. XM_035444787.1 → XP_035300678.1  MICAL-like protein 2 isoform X11

    UniProtKB/TrEMBL
    A0A8C2LJT7, A0A9J7JPB0
    Conserved Domains (4) summary
    cd09444
    Location:105 → 158
    LIM_Mical_like_1; This domain belongs to the LIM domain family which are found on Mical (molecule interacting with CasL) like proteins
    PHA03247
    Location:148 → 685
    PHA03247; large tegument protein UL36; Provisional
    pfam12130
    Location:746 → 872
    DUF3585; Protein of unknown function (DUF3585)
    cl00030
    Location:1 → 24
    CH_SF; calponin homology (CH) domain superfamily

  9. XM_027413486.2 → XP_027269287.1  MICAL-like protein 2 isoform X9

    UniProtKB/TrEMBL
    A0A8C2LJT7, A0A9J7FVQ0

  10. XM_027413487.2 → XP_027269288.1  MICAL-like protein 2 isoform X11

    UniProtKB/TrEMBL
    A0A8C2LJT7, A0A9J7JPB0
    Conserved Domains (4) summary
    cd09444
    Location:105 → 158
    LIM_Mical_like_1; This domain belongs to the LIM domain family which are found on Mical (molecule interacting with CasL) like proteins
    PHA03247
    Location:148 → 685
    PHA03247; large tegument protein UL36; Provisional
    pfam12130
    Location:746 → 872
    DUF3585; Protein of unknown function (DUF3585)
    cl00030
    Location:1 → 24
    CH_SF; calponin homology (CH) domain superfamily

  11. XM_027413489.2 → XP_027269290.1  MICAL-like protein 2 isoform X11

    UniProtKB/TrEMBL
    A0A8C2LJT7, A0A9J7JPB0
    Conserved Domains (4) summary
    cd09444
    Location:105 → 158
    LIM_Mical_like_1; This domain belongs to the LIM domain family which are found on Mical (molecule interacting with CasL) like proteins
    PHA03247
    Location:148 → 685
    PHA03247; large tegument protein UL36; Provisional
    pfam12130
    Location:746 → 872
    DUF3585; Protein of unknown function (DUF3585)
    cl00030
    Location:1 → 24
    CH_SF; calponin homology (CH) domain superfamily

  12. XM_027413492.2 → XP_027269293.1  MICAL-like protein 2 isoform X14

    UniProtKB/TrEMBL
    A0A9J7FUU7

RNA

  1. XR_004770002.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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