U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100841594 11-beta-hydroxysteroid dehydrogenase 1B [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100841594, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC100841594
Gene description
11-beta-hydroxysteroid dehydrogenase 1B
Locus tag
BRADI_5g08297v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC100841594 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 5 NC_016135.3 (10977462..10979237)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 5 NC_016135.2 (10922036..10923911)

Chromosome 5 - NC_016135.3Genomic Context describing neighboring genes Neighboring gene probable metal-nicotianamine transporter YSL5 Neighboring gene 11-beta-hydroxysteroid dehydrogenase 1B Neighboring gene uncharacterized LOC106865464 Neighboring gene recQ-mediated genome instability protein 1 Neighboring gene transfer RNA glycine (anticodon UCC)

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
11-beta-hydroxysteroid dehydrogenase 1B

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016135.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    10977462..10979237
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003579583.4 → XP_003579631.2  11-beta-hydroxysteroid dehydrogenase 1B

    UniProtKB/TrEMBL
    I1IX57
    Conserved Domains (2) summary
    pfam00106
    Location:51 → 238
    adh_short; short chain dehydrogenase
    cl21454
    Location:48 → 307
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases