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YBX1P5 Y-box binding protein 1 pseudogene 5 [ Homo sapiens (human) ]

Gene ID: 100861569, updated on 17-Sep-2024

Summary

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Official Symbol
YBX1P5provided by HGNC
Official Full Name
Y-box binding protein 1 pseudogene 5provided by HGNC
Primary source
HGNC:HGNC:42426
See related
AllianceGenome:HGNC:42426
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See YBX1P5 in Genome Data Viewer
Location:
5q13.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (72417559..72418526)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (72898742..72899709)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (71713386..71714353)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:71615660-71616200 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22648 Neighboring gene pentatricopeptide repeat domain 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16080 Neighboring gene ribosomal protein L10a pseudogene 8 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16081 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22649 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22650 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22651 Neighboring gene zinc finger protein 366 Neighboring gene Sharpr-MPRA regulatory region 3669 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16082 Neighboring gene uncharacterized LOC102503427 Neighboring gene TNPO1 divergent transcript

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_032056.2 

    Range
    101..1068
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    72417559..72418526
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    72898742..72899709
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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