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RNA5SP281 RNA, 5S ribosomal pseudogene 281 [ Homo sapiens (human) ]

Gene ID: 100873534, updated on 17-Sep-2024

Summary

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Official Symbol
RNA5SP281provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 281provided by HGNC
Primary source
HGNC:HGNC:43181
See related
Ensembl:ENSG00000252313 AllianceGenome:HGNC:43181
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S281
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Genomic context

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See RNA5SP281 in Genome Data Viewer
Location:
9p21.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (32293558..32293692)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (32309276..32309410)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (32293556..32293690)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376013 Neighboring gene uncharacterized LOC124902137 Neighboring gene uncharacterized LOC105376011 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_108038 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:32217123-32217659 Neighboring gene uncharacterized LOC107987059 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:32291373-32291872 Neighboring gene MPRA-validated peak7216 silencer Neighboring gene Sharpr-MPRA regulatory region 8424 Neighboring gene solute carrier family 25 member 5 pseudogene 8 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19825 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:32392965-32393536 Neighboring gene aconitase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, 5S ribosomal 281

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033360.1 

    Range
    101..235
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    32293558..32293692
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    32309276..32309410
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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