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RNA5SP357 RNA, 5S ribosomal pseudogene 357 [ Homo sapiens (human) ]

Gene ID: 100873616, updated on 17-Sep-2024

Summary

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Official Symbol
RNA5SP357provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 357provided by HGNC
Primary source
HGNC:HGNC:43257
See related
Ensembl:ENSG00000272435 AllianceGenome:HGNC:43257
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S357
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Genomic context

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See RNA5SP357 in Genome Data Viewer
Location:
12p11.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (34205699..34205817)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (34083333..34083451)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (34358634..34358752)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902915 Neighboring gene MPRA-validated peak1673 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:34258479-34258980 Neighboring gene MPRA-validated peak1674 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4343 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:34295166-34295666 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:34295667-34296167 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:34318092-34318285 Neighboring gene tubulin beta 8 class VIII pseudogene 4 Neighboring gene long intergenic non-protein coding RNA 2963 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_28337 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:34371322-34371822 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:34371823-34372323 Neighboring gene double homeobox 4 like 27 (pseudogene) Neighboring gene MPRA-validated peak1675 silencer Neighboring gene adenylate kinase 6 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, 5S ribosomal 357

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033503.1 

    Range
    101..219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    34205699..34205817
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    34083333..34083451
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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