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RNU5A-2P RNA, U5A small nuclear 2, pseudogene [ Homo sapiens (human) ]

Gene ID: 100873830, updated on 17-Sep-2024

Summary

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Official Symbol
RNU5A-2Pprovided by HGNC
Official Full Name
RNA, U5A small nuclear 2, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:42515
See related
Ensembl:ENSG00000207065 AllianceGenome:HGNC:42515
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU5A-2P in Genome Data Viewer
Location:
4q21.21
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (81334303..81334418)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (84664005..84664120)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (82255457..82255572)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene protein kinase cGMP-dependent 2 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr4:82085265-82086464 Neighboring gene PRKG2 antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:82135408-82135908 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:82135909-82136409 Neighboring gene uncharacterized LOC124900726 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:82296443-82296942 Neighboring gene Sharpr-MPRA regulatory region 8336 Neighboring gene RasGEF domain family member 1B Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15524 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:82407561-82408106 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr4:82414778-82415977 Neighboring gene uncharacterized LOC105377306

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_032610.1 

    Range
    101..216
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    81334303..81334418
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    84664005..84664120
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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