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RNU1-21P RNA, U1 small nuclear 21, pseudogene [ Homo sapiens (human) ]

Gene ID: 100873862, updated on 17-Sep-2024

Summary

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Official Symbol
RNU1-21Pprovided by HGNC
Official Full Name
RNA, U1 small nuclear 21, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:41947
See related
Ensembl:ENSG00000200197 AllianceGenome:HGNC:41947
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU1-21P in Genome Data Viewer
Location:
11q24.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (123763927..123764089)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (123792719..123792881)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (123634635..123634797)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:123599312-123600511 Neighboring gene zinc finger protein 202 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5687 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4022 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4023 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr11:123612953-123613550 Neighboring gene olfactory receptor family 6 subfamily X member 1 Neighboring gene uncharacterized LOC105369544 Neighboring gene olfactory receptor family 6 subfamily M member 1 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:123711437-123712636 Neighboring gene olfactory receptor family 6 subfamily M member 2 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_032636.1 

    Range
    101..263
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    123763927..123764089
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    123792719..123792881
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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