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DPYD-AS2 DPYD antisense RNA 2 [ Homo sapiens (human) ]

Gene ID: 100873933, updated on 10-Oct-2023

Summary

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Official Symbol
DPYD-AS2provided by HGNC
Official Full Name
DPYD antisense RNA 2provided by HGNC
Primary source
HGNC:HGNC:40196
See related
Ensembl:ENSG00000235777 AllianceGenome:HGNC:40196
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
1p21.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (97796921..97798051)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (97644767..97645896)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (98262477..98263607)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene dihydropyrimidine dehydrogenase Neighboring gene SEC63 homolog, protein translocation regulator pseudogene 1 Neighboring gene ribosomal protein L26 pseudogene 9 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1356 Neighboring gene MIA SH3 domain ER export factor 2 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1109 Neighboring gene long intergenic non-protein coding RNA 1930

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. LncRNA expression profile of ΔNp63α in cervical squamous cancers and its suppressive effects on LIF expression. Qian L, et al. Cytokine, 2017 Aug. PMID 28391028

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Other Names

  • DPYD antisense RNA 2 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046591.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC114878
    Related
    ENST00000422259.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    97796921..97798051
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    97644767..97645896
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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