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RBMS3-AS1 RBMS3 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100873977, updated on 17-Sep-2024

Summary

Official Symbol
RBMS3-AS1provided by HGNC
Official Full Name
RBMS3 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:39987
See related
Ensembl:ENSG00000235593 AllianceGenome:HGNC:39987
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See RBMS3-AS1 in Genome Data Viewer
Location:
3p24.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (29926811..29934156, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (29929239..29936560, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (29968302..29975647, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene RNA binding motif single stranded interacting protein 3 Neighboring gene MT-ND4L pseudogene 9 Neighboring gene NANOG hESC enhancer GRCh37_chr3:29910035-29910598 Neighboring gene uncharacterized LOC124906222 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:30014055-30014647 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:30100685-30101217 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_69254 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:30125981-30126860 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:30126861-30127738 Neighboring gene uncharacterized LOC124906224 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_69363 Neighboring gene uncharacterized LOC124909358 Neighboring gene small nucleolar RNA U3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • RBMS3 antisense RNA 1 (non-protein coding)

Clone Names

  • AC099048.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046556.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    DB075940
    Related
    ENST00000414547.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    29926811..29934156 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    29929239..29936560 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)