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HMGN2P29 high mobility group nucleosomal binding domain 2 pseudogene 29 [ Homo sapiens (human) ]

Gene ID: 100874472, updated on 10-Oct-2023

Summary

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Official Symbol
HMGN2P29provided by HGNC
Official Full Name
high mobility group nucleosomal binding domain 2 pseudogene 29provided by HGNC
Primary source
HGNC:HGNC:39396
See related
AllianceGenome:HGNC:39396
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See HMGN2P29 in Genome Data Viewer
Location:
6q22.31
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (121408411..121409015)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (122595465..122596069)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (121729557..121730161)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 1286, pseudogene Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr6:121697099-121697600 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr6:121697601-121698100 Neighboring gene ribosomal protein S15a pseudogene 21 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_89339 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:121751780-121752762 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:121759052-121759929 Neighboring gene uncharacterized LOC124901515 Neighboring gene gap junction protein alpha 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:121768314-121768814 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:121768815-121769315 Neighboring gene RNA, U4 small nuclear 35, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Retroposed copies of the HMG genes: a window to genome dynamics. Strichman-Almashanu LZ, et al. Genome Res, 2003 May. PMID 12727900, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_032286.2 

    Range
    68..672
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    121408411..121409015
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    122595465..122596069
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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