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LOC100909443 homeobox protein Hox-A11-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 100909443, discontinued on 1-Feb-2021
  • This record was withdrawn by the Rat Genome Database (RGD).

Summary

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Symbol
LOC100909443provided by RGD
Full Name
homeobox protein Hox-A11-likeprovided by RGD
Primary source
RGD:6503602
Gene type
protein coding
RefSeq status
WITHDRAWN
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
DISCONTINUED: This record was withdrawn by the Rat Genome Database (RGD).
Expression
Biased expression in Uterus (RPKM 84.9), Kidney (RPKM 29.6) and 1 other tissue See more
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Genomic context

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See LOC100909443 in Genome Data Viewer
Location:
4q24
Exon count:
2
Annotation release Status Assembly Chr Location
106 latest, but not current Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (82211364..82215190, complement)
106 latest, but not current Rn_Celera (GCF_000002265.2) 4 AC_000072.1 (76233119..76236945, complement)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

General protein information

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Names
homeobox protein Hox-A11-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005103.4 Reference Rnor_6.0 Primary Assembly

    Range
    82211364..82215190 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003749752.3 → XP_003749800.1  

Alternate Rn_Celera

Genomic

  1. AC_000072.1 Alternate Rn_Celera

    Range
    76233119..76236945 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008775740.1 → XP_008773962.1  

Gene LinkOut

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