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LOC100909630 class II histocompatibility antigen, M beta 1 chain-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 100909630, discontinued on 23-Mar-2021
  • This record has been withdrawn by NCBI staff. This record represented a gene that is not currently annotated by NCBI.

Summary

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Symbol
LOC100909630provided by RGD
Full Name
class II histocompatibility antigen, M beta 1 chain-likeprovided by RGD
Primary source
RGD:6502739
Gene type
protein coding
RefSeq status
WITHDRAWN
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
DISCONTINUED: This record has been withdrawn by NCBI staff. This record represented a gene that is not currently annotated by NCBI.
Expression
Biased expression in Spleen (RPKM 405.8), Thymus (RPKM 293.2) and 9 other tissues See more
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Genomic context

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See LOC100909630 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
6
Sequence:
Chromosome: 20; NC_005119.4 (3945564..3952839)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005119.4 chromosome 20 reference Rnor_6.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

General protein information

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Names
class II histocompatibility antigen, M beta 1 chain-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 105 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005119.4 Reference Rnor_6.0 Primary Assembly

    Range
    3945564..3952839
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003751925.3 → XP_003751973.1  

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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