U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

P3r3urf PIK3R3 upstream open reading frame [ Rattus norvegicus (Norway rat) ]

Gene ID: 100911669, updated on 2-Nov-2024

Summary

Official Symbol
P3r3urfprovided by RGD
Official Full Name
PIK3R3 upstream open reading frameprovided by RGD
Primary source
RGD:6491750
See related
EnsemblRapid:ENSRNOG00000049874 AllianceGenome:RGD:6491750
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to human P3R3URF (PIK3R3 upstream open reading frame). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward (RPKM 256.1) See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See P3r3urf in Genome Data Viewer
Location:
5q35
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (134893003..134909941)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (129656654..129673140)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (135029480..135046282)

Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene leucine rich adaptor protein 1 Neighboring gene protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) Neighboring gene tetraspanin 1 Neighboring gene uncharacterized LOC120103122 Neighboring gene transfer RNA proline (anticodon AGG) 7 Neighboring gene phosphoinositide-3-kinase regulatory subunit 3

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
PIK3R3 upstream open reading frame protein
Names
PIK3R3 upstream reading frame

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001399355.1NP_001386284.1  PIK3R3 upstream open reading frame protein

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000005
    UniProtKB/TrEMBL
    A6JZ69, M0RCQ3
    Related
    ENSRNOP00000067380.1, ENSRNOT00000074860.3

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086023.1 Reference GRCr8

    Range
    134893003..134909941
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008763983.4XP_008762205.1  PIK3R3 upstream open reading frame protein isoform X1

    See identical proteins and their annotated locations for XP_008762205.1