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LOC100912002 uncharacterized LOC100912002 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100912002, updated on 17-Aug-2024

Summary

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Symbol
LOC100912002provided by RGD
Full Name
uncharacterized LOC100912002provided by RGD
Primary source
RGD:6489294
See related
AllianceGenome:RGD:6489294
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Adrenal (RPKM 122.4), Thymus (RPKM 113.3) and 9 other tissues See more
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Genomic context

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See LOC100912002 in Genome Data Viewer
Location:
10q32.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (102774733..102776874)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (102275964..102278092)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (106021707..106023856)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene major facilitator superfamily domain containing 11 Neighboring gene alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B Neighboring gene small Cajal body-specific RNA 16 Neighboring gene SEC14-like lipid binding 1 Neighboring gene ribosomal protein L12, pseudogene 9 Neighboring gene uncharacterized LOC102547461

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    102774733..102776874
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    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_146205.6 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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