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LOC100912629 uncharacterized LOC100912629 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100912629, updated on 17-Aug-2024

Summary

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Symbol
LOC100912629provided by RGD
Full Name
uncharacterized LOC100912629provided by RGD
Primary source
RGD:6486111
See related
AllianceGenome:RGD:6486111
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Heart (RPKM 28.3), Kidney (RPKM 20.2) and 4 other tissues See more
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Genomic context

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See LOC100912629 in Genome Data Viewer
Location:
10q32.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (89648104..89652237, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (89148123..89152191, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (92298476..92303762, complement)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene corticotropin releasing hormone receptor 1 Neighboring gene signal peptide peptidase like 2C Neighboring gene microtubule-associated protein tau Neighboring gene uncharacterized LOC134480886 Neighboring gene uncharacterized LOC134480887

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    89648104..89652237 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_146198.6 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials