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LOC100996437 uncharacterized LOC100996437 [ Homo sapiens (human) ]

Gene ID: 100996437, updated on 10-Oct-2023

Summary

Gene symbol
LOC100996437
Gene description
uncharacterized LOC100996437
See related
Ensembl:ENSG00000226824
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 2.4), fat (RPKM 0.8) and 24 other tissues See more
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Genomic context

Location:
7q11.21
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (66654519..66669602)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (67874183..67889266)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (66119506..66134589)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene ribosomal protein L35 pseudogene 5 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18209 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18210 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26084 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26085 Neighboring gene potassium channel tetramerization domain containing 7 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:66118787-66119392 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:66119393-66119998 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:66119999-66120604 Neighboring gene MPRA-validated peak6548 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:66131083-66131823 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:66131824-66132563 Neighboring gene RAB guanine nucleotide exchange factor 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:66146939-66147678 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:66157983-66158483 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:66161889-66162390 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:66192681-66193181 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26086 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:66205397-66206063 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26087 Neighboring gene uncharacterized LOC107986707 Neighboring gene GrpE like 1, mitochondrial pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110037.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AI937214, BF512337, BM826587, HY006622
    Related
    ENST00000656515.3

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    66654519..66669602
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    67874183..67889266
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)