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LOC100996664 uncharacterized LOC100996664 [ Homo sapiens (human) ]

Gene ID: 100996664, updated on 17-Sep-2024

Summary

Gene symbol
LOC100996664
Gene description
uncharacterized LOC100996664
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC100996664 in Genome Data Viewer
Location:
14q24.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (68625527..68628787, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (62832407..62835670, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (69092244..69095504, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene RAD51 paralog B Neighboring gene uncharacterized LOC124903335 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:69035996-69036508 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_36356 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:69052085-69052586 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_36364 Neighboring gene uncharacterized LOC107984016 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:69073752-69074398 Neighboring gene Sharpr-MPRA regulatory region 11310 Neighboring gene ReSE screen-validated silencer GRCh37_chr14:69086033-69086224 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5868 Neighboring gene uncharacterized LOC124903333 Neighboring gene ReSE screen-validated silencer GRCh37_chr14:69124801-69124929 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8611 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:69136154-69136654 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:69136655-69137155 Neighboring gene Sharpr-MPRA regulatory region 15027 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:69143042-69143542 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:69143543-69144043 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:69149771-69150316 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:69150317-69150861 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8612 Neighboring gene ribosomal protein L12 pseudogene 7

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_135816.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL121820

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    68625527..68628787 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    62832407..62835670 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)