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Lincred2 long intergenic non-protein coding RNA of erythroid differentiation 2 [ Mus musculus (house mouse) ]

Gene ID: 100996932, updated on 17-Aug-2024

Summary

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Official Symbol
Lincred2provided by MGI
Official Full Name
long intergenic non-protein coding RNA of erythroid differentiation 2provided by MGI
Primary source
MGI:MGI:5428673
See related
AllianceGenome:MGI:5428673
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Red2
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Lincred2 in Genome Data Viewer
Location:
4 D2.1; 4
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (118908203..118919161)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (119051006..119061964)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene 12865 Neighboring gene STARR-positive B cell enhancer ABC_E6203 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene STARR-seq mESC enhancer starr_11215 Neighboring gene VISTA enhancer mm165 Neighboring gene predicted gene, 54254 Neighboring gene STARR-seq mESC enhancer starr_11219 Neighboring gene predicted gene 12866 Neighboring gene STARR-seq mESC enhancer starr_11222 Neighboring gene predicted gene, 35510 Neighboring gene STARR-positive B cell enhancer ABC_E6204 Neighboring gene STARR-positive B cell enhancer ABC_E3506 Neighboring gene predicted gene, 52706

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Novel roles for KLF1 in erythropoiesis revealed by mRNA-seq. Tallack MR, et al. Genome Res, 2012 Dec. PMID 22835905, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    118908203..118919161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_868064.2 RNA Sequence

  2. XR_376588.3 RNA Sequence

  3. XR_868065.2 RNA Sequence

  4. XR_376589.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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