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Msantd5f2 Myb/SANT DNA binding domain containing 5 family member 2 [ Mus musculus (house mouse) ]

Gene ID: 101055863, updated on 2-Nov-2024

Summary

Official Symbol
Msantd5f2provided by MGI
Official Full Name
Myb/SANT DNA binding domain containing 5 family member 2provided by MGI
Primary source
MGI:MGI:3702319
See related
Ensembl:ENSMUSG00000095048 AllianceGenome:MGI:3702319
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm11239
Summary
This gene belongs to a family of related genes tandemly arranged in two clusters on chromosome 4. This family, which appears to be mouse-specific and composed of multiple highly similar members, is supported by limited transcript data. Members of the family maintain an intact open reading frame although the encoded protein has no known function. This gene is inferred from alignment of paralogous transcripts. [provided by RefSeq, Apr 2013]
Expression
Low expression observed in reference dataset See more
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Genomic context

See Msantd5f2 in Genome Data Viewer
Location:
4 C3; 4 36.06 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (73584255..73590635)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (73666018..73672398)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene Myb/SANT DNA binding domain containing 5 family member 4 Neighboring gene Myb/SANT DNA binding domain containing 5 family member 3 Neighboring gene Myb/SANT DNA binding domain containing 5 family member 1 Neighboring gene RAS and EF hand domain containing

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC101055863

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001277487.1NP_001264416.1  uncharacterized protein LOC101055863

    Status: PREDICTED

    Source sequence(s)
    BX294159
    UniProtKB/TrEMBL
    E9Q5Z9
    Related
    ENSMUSP00000125805.3, ENSMUST00000171348.9

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    73584255..73590635
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)