U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GPC3 glypican 3 [ Felis catus (domestic cat) ]

Gene ID: 101094739, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
GPC3
Official Full Name
glypican 3
Primary source
VGNC:VGNC:67405
See related
EnsemblRapid:ENSFCTG00005002545
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GPC3 in Genome Data Viewer
Location:
chromosome: X
Exon count:
8
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) X NC_058386.1 (109726724..110148703, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) X NC_018741.3 (112443529..112865784, complement)

Chromosome X - NC_058386.1Genomic Context describing neighboring genes Neighboring gene glypican 4 Neighboring gene uncharacterized LOC123383450 Neighboring gene 40S ribosomal protein S26-like Neighboring gene nicalin-like Neighboring gene cytochrome c oxidase subunit 6B1-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein localization to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glypican-3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058386.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    109726724..110148703 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023249386.2 → XP_023105154.1  glypican-3 isoform X2

    Conserved Domains (1) summary
    pfam01153
    Location:14 → 474
    Glypican

  2. XM_023249385.2 → XP_023105153.1  glypican-3 isoform X1

    UniProtKB/TrEMBL
    A0A337S4V2, M3W6M5
    Related
    ENSFCTP00005004421.1, ENSFCTT00005006856.1
    Conserved Domains (1) summary
    pfam01153
    Location:14 → 577
    Glypican
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.