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PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase [ Felis catus (domestic cat) ]

Gene ID: 101096675, updated on 8-Mar-2024

Summary

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Gene symbol
PGAM5
Gene description
PGAM family member 5, mitochondrial serine/threonine protein phosphatase
See related
EnsemblRapid:ENSFCTG00005026903
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See PGAM5 in Genome Data Viewer
Location:
chromosome: D3
Exon count:
7
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) D3 NC_058379.1 (599744..607120, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) D3 NC_018734.3 (555570..562928, complement)

Chromosome D3 - NC_058379.1Genomic Context describing neighboring genes Neighboring gene golgin A3 Neighboring gene ankyrin repeat and LEM domain containing 2 Neighboring gene peroxisomal membrane protein 2 Neighboring gene DNA polymerase epsilon, catalytic subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and comparative genomic analysis of 1227 Felis catus cDNA sequences enriched for developmental, clinical and nutritional phenotypes. Irizarry KJ, et al. BMC Genomics, 2012 Jan 18. PMID 22257742, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of mitochondrial fission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein phosphatase PGAM5, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058379.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    599744..607120 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023241224.2 → XP_023096992.1  serine/threonine-protein phosphatase PGAM5, mitochondrial isoform X2

    UniProtKB/TrEMBL
    M3VYM1
    Conserved Domains (1) summary
    PTZ00122
    Location:58 → 285
    PTZ00122; phosphoglycerate mutase; Provisional

  2. XM_023241223.2 → XP_023096991.1  serine/threonine-protein phosphatase PGAM5, mitochondrial isoform X1

    Conserved Domains (1) summary
    PTZ00122
    Location:58 → 286
    PTZ00122; phosphoglycerate mutase; Provisional

  3. XM_023241225.2 → XP_023096993.1  serine/threonine-protein phosphatase PGAM5, mitochondrial isoform X3

    Related
    ENSFCTP00005053464.1, ENSFCTT00005076149.1
    Conserved Domains (1) summary
    PTZ00122
    Location:58 → 249
    PTZ00122; phosphoglycerate mutase; Provisional
Nucleotide Protein
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Gene LinkOut

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