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PPARD peroxisome proliferator activated receptor delta [ Felis catus (domestic cat) ]

Gene ID: 101098383, updated on 17-Aug-2024

Summary

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Official Symbol
PPARD
Official Full Name
peroxisome proliferator activated receptor delta
Primary source
VGNC:VGNC:68976
See related
EnsemblRapid:ENSFCTG00005028837
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See PPARD in Genome Data Viewer
Location:
chromosome: B2
Exon count:
9
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) B2 NC_058372.1 (33881905..33966117)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) B2 NC_018727.3 (36714514..36798128)

Chromosome B2 - NC_058372.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 76 Neighboring gene DEF6 guanine nucleotide exchange factor Neighboring gene E3 ubiquitin-protein ligase makorin-1-like Neighboring gene uncharacterized LOC109499640 Neighboring gene FA complementation group E

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hormone-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisome proliferator-activated receptor delta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058372.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    33881905..33966117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011282251.4 → XP_011280553.1  peroxisome proliferator-activated receptor delta isoform X1

    See identical proteins and their annotated locations for XP_011280553.1

    UniProtKB/TrEMBL
    A0A2I2U3X3, M3X369
    Related
    ENSFCTP00005056256.1, ENSFCTT00005081085.1
    Conserved Domains (2) summary
    cd06932
    Location:196 → 463
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cd06965
    Location:96 → 179
    NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers

  2. XM_019830482.3 → XP_019686041.1  peroxisome proliferator-activated receptor delta isoform X3

    UniProtKB/TrEMBL
    M3X369
    Conserved Domains (2) summary
    cd06932
    Location:135 → 402
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cl02596
    Location:57 → 118
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers

  3. XM_011282253.4 → XP_011280555.1  peroxisome proliferator-activated receptor delta isoform X2

    UniProtKB/TrEMBL
    M3X369
    Related
    ENSFCTP00005056295.1, ENSFCTT00005081169.1
    Conserved Domains (2) summary
    cd06932
    Location:173 → 440
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cd06965
    Location:73 → 156
    NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers

  4. XM_045057428.1 → XP_044913363.1  peroxisome proliferator-activated receptor delta isoform X1

    UniProtKB/TrEMBL
    A0A2I2U3X3, M3X369
    Related
    ENSFCTP00005056211.1, ENSFCTT00005080976.1
    Conserved Domains (2) summary
    cd06932
    Location:196 → 463
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cd06965
    Location:96 → 179
    NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers

  5. XM_019830483.3 → XP_019686042.1  peroxisome proliferator-activated receptor delta isoform X3

    UniProtKB/TrEMBL
    M3X369
    Related
    ENSFCTP00005056238.1, ENSFCTT00005081043.1
    Conserved Domains (2) summary
    cd06932
    Location:135 → 402
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cl02596
    Location:57 → 118
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers

  6. XM_019830484.3 → XP_019686043.1  peroxisome proliferator-activated receptor delta isoform X3

    UniProtKB/TrEMBL
    M3X369
    Conserved Domains (2) summary
    cd06932
    Location:135 → 402
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cl02596
    Location:57 → 118
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
Nucleotide Protein
Heading Accession and Version

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