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CAV1 caveolin 1 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101675955, updated on 8-Mar-2024

Summary

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Gene symbol
CAV1
Gene description
caveolin 1
See related
Ensembl:ENSMPUG00000007224
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Also known as
Caveolin-1
Orthologs
human mouse all
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Genomic context

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See CAV1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421998.1 (73540400..73576325)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569148.1 (21195587..21231452, complement)

NW_025421998.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123387035 Neighboring gene testin LIM domain protein Neighboring gene caveolin 2 Neighboring gene MET proto-oncogene, receptor tyrosine kinase Neighboring gene capping actin protein of muscle Z-line subunit alpha 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for the domestic ferret. Bruder CE, et al. BMC Genomics, 2010 Apr 19. PMID 20403183, Free PMC Article
  2. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  3. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in caveola assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of endothelial cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in caveola IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
caveolin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421998.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    73540400..73576325
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004741919.3 → XP_004741976.1  caveolin-1 isoform X1

    See identical proteins and their annotated locations for XP_004741976.1

    UniProtKB/Swiss-Prot
    Q07E25
    UniProtKB/TrEMBL
    M1EEE8
    Related
    ENSMPUP00000007166.1
    Conserved Domains (1) summary
    pfam01146
    Location:43 → 175
    Caveolin; Caveolin

  2. XM_004741921.3 → XP_004741978.1  caveolin-1 isoform X2

    UniProtKB/TrEMBL
    A0A8U0MH35, M1EEE8
    Conserved Domains (1) summary
    pfam01146
    Location:12 → 144
    Caveolin; Caveolin
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q07E25.1 GenPept UniProtKB/Swiss-Prot:Q07E25

Gene LinkOut

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