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Tbx1 T-box transcription factor 1 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101833860, updated on 8-Mar-2024

Summary

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Gene symbol
Tbx1
Gene description
T-box transcription factor 1
See related
EnsemblRapid:ENSMAUG00000030262
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429192.1 (74051562..74058698, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801677.1 (7156373..7161089)

NW_024429192.1Genomic Context describing neighboring genes Neighboring gene catechol-O-methyltransferase Neighboring gene thioredoxin reductase 2 Neighboring gene retrotransposon Gag like 10 Neighboring gene G protein subunit beta 1 like Neighboring gene septin 5 Neighboring gene glycoprotein Ib platelet subunit beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters. Ying B, et al. Virology, 2015 Nov. PMID 26319212, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell fate specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-box transcription factor TBX1
Names
T-box 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429192.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    74051562..74058698 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005077508.4 → XP_005077565.2  T-box transcription factor TBX1 isoform X1

    Conserved Domains (1) summary
    smart00425
    Location:149 → 341
    TBOX; Domain first found in the mice T locus (Brachyury) protein

  2. XM_040751184.1 → XP_040607118.1  T-box transcription factor TBX1 isoform X2

    Related
    ENSMAUP00000034333.1, ENSMAUT00000067503.1
    Conserved Domains (1) summary
    smart00425
    Location:99 → 291
    TBOX; Domain first found in the mice T locus (Brachyury) protein

  3. XM_040751185.1 → XP_040607119.1  T-box transcription factor TBX1 isoform X2

    Conserved Domains (1) summary
    smart00425
    Location:99 → 291
    TBOX; Domain first found in the mice T locus (Brachyury) protein
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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