U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PRMT5-DT PRMT5 divergent transcript [ Homo sapiens (human) ]

Gene ID: 101926933, updated on 10-Oct-2023

Summary

Official Symbol
PRMT5-DTprovided by HGNC
Official Full Name
PRMT5 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:55482
See related
Ensembl:ENSG00000257285 AllianceGenome:HGNC:55482
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
14q11.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (22929609..22954692)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (17127686..17155309)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (23398818..23423901)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5595 Neighboring gene PRMT5 antisense RNA 1 Neighboring gene uncharacterized LOC124903285 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr14:23395171-23396370 Neighboring gene protein arginine methyltransferase 5 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8154 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5596 Neighboring gene tRNA-Arg (anticodon ACG) 1-3 Neighboring gene HAUS augmin like complex subunit 4 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8155 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:23426503-23427082 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:23427083-23427661 Neighboring gene microRNA 4707 Neighboring gene H3K27ac hESC enhancer GRCh37_chr14:23444107-23444607 Neighboring gene ajuba LIM protein Neighboring gene Sharpr-MPRA regulatory region 809 Neighboring gene uncharacterized LOC124903287

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110002.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL132780, DA905235
    Related
    ENST00000548819.5

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    22929609..22954692
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    17127686..17155309
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)