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LOC101926959 uncharacterized LOC101926959 [ Homo sapiens (human) ]

Gene ID: 101926959, updated on 17-Jun-2024

Summary

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Gene symbol
LOC101926959
Gene description
uncharacterized LOC101926959
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward lung (RPKM 13.9) See more
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Genomic context

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See LOC101926959 in Genome Data Viewer
Location:
2q11.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (95665550..95668724)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (96172169..96175346)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124905589 Neighboring gene UBTF like 3 (pseudogene) Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:96314951-96315641 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:96349017-96349517 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:96420911-96421411 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:96427757-96428671 Neighboring gene MPRA-validated peak3793 silencer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:96444078-96444634 Neighboring gene glycerol-3-phosphate acyltransferase 2, mitochondrial Neighboring gene glycerol-3-phosphate acyltransferase 2 pseudogene 1 Neighboring gene long intergenic non-protein coding RNA 342

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Clone Names

  • AC008268.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    95665550..95668724
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007087142.1 RNA Sequence

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791760.1 Reference GRCh38.p14 PATCHES

    Range
    427825..431002
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_923078.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    96172169..96175346
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007072305.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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