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LOC101927118 uncharacterized LOC101927118 [ Homo sapiens (human) ]

Gene ID: 101927118, updated on 17-Jun-2024

Summary

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Gene symbol
LOC101927118
Gene description
uncharacterized LOC101927118
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.5) See more
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Genomic context

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See LOC101927118 in Genome Data Viewer
Location:
8q21.13
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (81461458..81579444)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (81893056..82011037)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375926 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:82298809-82299309 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:82339748-82340344 Neighboring gene peripheral myelin protein 2 Neighboring gene fatty acid binding protein 9 Neighboring gene fatty acid binding protein 4 Neighboring gene ferritin heavy chain 1 pseudogene 11 Neighboring gene fatty acid binding protein 12 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:82512159-82512934 Neighboring gene inositol monophosphatase 1 pseudogene 1 Neighboring gene NIPA2 pseudogene 4 Neighboring gene ribosomal protein S26 pseudogene 34

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    81461458..81579444
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001745980.2 RNA Sequence

  2. XR_242492.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    81893056..82011037
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079179.1 RNA Sequence

  2. XR_007079178.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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