U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101927511 uncharacterized LOC101927511 [ Homo sapiens (human) ]

Gene ID: 101927511, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC101927511
Gene description
uncharacterized LOC101927511
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
18p11.21
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (11910549..11948183, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (12073116..12110897, complement)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene G protein subunit alpha L Neighboring gene uncharacterized LOC124904252 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9301 Neighboring gene metallophosphoesterase 1 Neighboring gene CRISPRi-validated cis-regulatory element chr18.397 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:11951641-11952330 Neighboring gene Sharpr-MPRA regulatory region 7933 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13098 Neighboring gene inositol monophosphatase 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:12038197-12038698 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9304 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13099 Neighboring gene kinesin-like protein KIF1C Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:12058991-12059532 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:12059533-12060072 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:12060615-12061154

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    11910549..11948183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007066296.1 RNA Sequence

  2. XR_007066293.1 RNA Sequence

  3. XR_007066294.1 RNA Sequence

  4. XR_243835.5 RNA Sequence

  5. XR_001753359.2 RNA Sequence

  6. XR_001753361.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    12073116..12110897 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007088340.1 RNA Sequence

  2. XR_007088336.1 RNA Sequence

  3. XR_007088338.1 RNA Sequence

  4. XR_007088335.1 RNA Sequence

  5. XR_007088337.1 RNA Sequence

  6. XR_007088339.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases