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ANO7L1 anoctamin 7 like 1 (pseudogene) [ Homo sapiens (human) ]

Gene ID: 101927546, updated on 17-Sep-2024

Summary

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Official Symbol
ANO7L1provided by HGNC
Official Full Name
anoctamin 7 like 1 (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:32248
See related
AllianceGenome:HGNC:32248
Gene type
pseudo
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ANO7P1; TMEM16M; C1orf224
Expression
Broad expression in esophagus (RPKM 1.8), salivary gland (RPKM 1.1) and 23 other tissues See more
Orthologs
all
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Genomic context

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See ANO7L1 in Genome Data Viewer
Location:
1p36.13
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (16215907..16226931, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (15657234..15668420, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene EPH receptor A2 Neighboring gene EPHA2 antisense RNA 1 Neighboring gene hESC enhancers GRCh37_chr1:16488540-16489068 and GRCh37_chr1:16489069-16489596 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16489597-16490124 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16490125-16490652 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16491605-16492545 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 324 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16494833-16495478 Neighboring gene Sharpr-MPRA regulatory region 6356 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16508387-16509367 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:16510195-16510694 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:16510785-16511286 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:16511287-16511786 Neighboring gene Rho guanine nucleotide exchange factor 19 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 325 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 326 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16533787-16534760 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16534761-16535733 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16538951-16539649 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 327 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:16542837-16543533 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 328 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 329 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:16557534-16558362 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:16563171-16563715 Neighboring gene ciliogenesis and planar polarity effector complex subunit 2 Neighboring gene metallothionein 1X pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Homology

Other Names

  • anoctamin 7 pseudogene 1
  • anoctamin-4-like
  • transmembrane protein 16M

Clone Names

  • FLJ33962

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    16215907..16226931 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007065494.1 RNA Sequence

  2. XR_007065492.1 RNA Sequence

  3. XR_007065491.1 RNA Sequence

  4. XR_007065493.1 RNA Sequence

  5. XR_007065489.1 RNA Sequence

  6. XR_007065490.1 RNA Sequence

  7. XR_007065498.1 RNA Sequence

  8. XR_007065497.1 RNA Sequence

  9. XR_007065495.1 RNA Sequence

  10. XR_007065496.1 RNA Sequence

  11. XR_007065488.1 RNA Sequence

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791756.1 Reference GRCh38.p14 PATCHES

    Range
    20044..31222 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007069393.1 RNA Sequence

  2. XR_007069398.1 RNA Sequence

  3. XR_007069396.1 RNA Sequence

  4. XR_007069395.1 RNA Sequence

  5. XR_007069397.1 RNA Sequence

  6. XR_007069394.1 RNA Sequence

  7. XR_007069402.1 RNA Sequence

  8. XR_007069401.1 RNA Sequence

  9. XR_007069399.1 RNA Sequence

  10. XR_007069400.1 RNA Sequence

  11. XR_007069392.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    15657234..15668420 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007069881.1 RNA Sequence

  2. XR_007069886.1 RNA Sequence

  3. XR_007069884.1 RNA Sequence

  4. XR_007069883.1 RNA Sequence

  5. XR_007069885.1 RNA Sequence

  6. XR_007069882.1 RNA Sequence

  7. XR_007069890.1 RNA Sequence

  8. XR_007069889.1 RNA Sequence

  9. XR_007069887.1 RNA Sequence

  10. XR_007069888.1 RNA Sequence

Nucleotide Protein
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