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THRB-AS2 THRB antisense RNA 2 [ Homo sapiens (human) ]

Gene ID: 101927854, updated on 17-Sep-2024

Summary

Official Symbol
THRB-AS2provided by HGNC
Official Full Name
THRB antisense RNA 2provided by HGNC
Primary source
HGNC:HGNC:54854
See related
AllianceGenome:HGNC:54854
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in placenta (RPKM 1.0), thyroid (RPKM 0.8) and 8 other tissues See more
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Genomic context

See THRB-AS2 in Genome Data Viewer
Location:
3p24.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (24151324..24189956)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (24155838..24194461)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (24192815..24231447)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 691 Neighboring gene nucleophosmin 1 pseudogene 23 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr3:24184437-24185636 Neighboring gene MPRA-validated peak4578 silencer Neighboring gene thyroid hormone receptor beta Neighboring gene GATA motif-containing MPRA enhancer 252 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:24401392-24402024 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:24437700-24438265 Neighboring gene Sharpr-MPRA regulatory region 12793 Neighboring gene HNF4 motif-containing MPRA enhancer 120 Neighboring gene ribosomal protein L31 pseudogene 20 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:24538119-24538324 Neighboring gene THRB antisense RNA 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Genome-wide meta-analysis of systolic blood pressure in children with sickle cell disease.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_121667.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    CB994391

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    24151324..24189956
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    24155838..24194461
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)