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LOC101927857 uncharacterized LOC101927857 [ Homo sapiens (human) ]

Gene ID: 101927857, updated on 17-Sep-2024

Summary

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Gene symbol
LOC101927857
Gene description
uncharacterized LOC101927857
See related
Ensembl:ENSG00000286559
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC101927857 in Genome Data Viewer
Location:
18q12.3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (39650933..39665488)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (39846330..39871755)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene MIR924 host gene Neighboring gene ribosomal protein L7a pseudogene 66 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:36969419-36970128 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:37145172-37145802 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:37145803-37146432 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:37171224-37172126 Neighboring gene microRNA 924 Neighboring gene RNA, U6 small nuclear 1242, pseudogene Neighboring gene microRNA 5583-2 Neighboring gene microRNA 5583-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    39650933..39665488
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001753416.3 RNA Sequence

  2. XR_007066448.1 RNA Sequence

  3. XR_007066449.1 RNA Sequence

    Related
    ENST00000670258.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    39846330..39871755
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007088403.1 RNA Sequence

  2. XR_007088401.1 RNA Sequence

  3. XR_007088402.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials