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LOC101928254 uncharacterized LOC101928254 [ Homo sapiens (human) ]

Gene ID: 101928254, updated on 10-Oct-2023

Summary

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Gene symbol
LOC101928254
Gene description
uncharacterized LOC101928254
See related
Ensembl:ENSG00000219445
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC101928254 in Genome Data Viewer
Location:
7q31.33
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (125229579..125264291, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (126546958..126581670, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (124869633..124904345, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2830 Neighboring gene chromosome 11 open reading frame 58 pseudogene Neighboring gene uncharacterized LOC101928283 Neighboring gene Sharpr-MPRA regulatory region 1923 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:124897466-124898452 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:124898453-124899438 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:124903631-124904510 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:124904511-124905389 Neighboring gene NANOG hESC enhancer GRCh37_chr7:124919983-124920484 Neighboring gene ribosomal protein L31 pseudogene 39 Neighboring gene MTX2 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Toward a complete human genome sequence. Sanger Center, et al. Genome Res, 1998 Nov. PMID 9847074

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110182.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC019155, EF565094
    Related
    ENST00000420224.1

  2. NR_110183.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an internal exon, compared to variant 1.
    Source sequence(s)
    AC019155, CV808846, EF565094

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    125229579..125264291 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    126546958..126581670 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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